[Orechem] [Fwd: orechem-article, Crystal-Eye atom feeds validation]

[Peter Murray-Rust]

Thanks,
Hopefully I'll debrief with people before tomorrow meeting.

On Thu, Dec 3, 2009 at 2:17 PM, Marlon Pierce <mpierce at cs.indiana.edu>wrote:

>  I'm not sure this made it through, so I'm posting again.  Additional note:
> the only tool we have found that can do the ORE GRDDL transforms is Saxon.
> Foresite (both Java and Python versions) and Jena didn't work.  Li Na's
> feeds worked for us without modification using Saxon. The others required
> some modifications.
>
> Original XML attachments bounced, so here are links to them (hopefully
> public):
>
> Modified Article Atom:
> https://www.slashtmp.iu.edu/public/download.php?FILE=marpierc/60769zzUwGE
>
> Modified CrystalEye Atom:
> https://www.slashtmp.iu.edu/public/download.php?FILE=marpierc/63985LbH743
>
>
>
> Marlon
>
>
> -------- Original Message --------  Subject: orechem-article, Crystal-Eye
> atom feeds validation  Date: Wed, 2 Dec 2009 10:21:06 -0600  From: Rameswara
> Sashi Kiran Challa <schalla at umail.iu.edu> <schalla at umail.iu.edu>  To: Marlon
> Pierce <mpierce at cs.indiana.edu> <mpierce at cs.indiana.edu>
>
> Hi all,
> We validated the two Atom feeds that we have now with the Feed Validator<http://feedvalidator.org/>and the ORE
> Atom Resource Map Validator <http://african.lanl.gov/ovalnet/validate.jsp>.
> These validators were mentioned in the Open Archives' "Tools and
> Additional Resources <http://www.openarchives.org/ore/1.0/tools>"
> document.
> The modified feeds are attached below. The following are the modifications
> done:
>
> 1) orechem-article-atom
>    According to the Feed Validator made small corrections in typos and the
> syntax of the <atom:id> and <atom:updated>  tags.
>    According to the ORE Atom Resource Map Validator and looking into the "ORE
> User Guide-Resource Map Implementation in Atom<http://www.openarchives.org/ore/1.0/atom>"
> document added two <atom:category> tags.
>
> 2)Crystal-Eye feed
>   According to the Feed validator, made corrections in typos and the syntax
> of <atom:id> tags. For the sake of validation just used one of the valid id
> tag's value present in the feed for all other <atom:id> tags.
>  The ORE Atom Resource Map Validator gave a lot of errors. So haven't made
> any changes according to that.
>
> Please take a look into these.
>
> Thanks
> Regards
> Sashikiran
>
>
>
>
> --
> Sashikiran Challa
> MS Cheminformatics,
> School of Informatics and Computing,
> Indiana University, Bloomington,IN
> schalla at indiana.edu
> 812-606-3254
>
>
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>
>


-- 
Peter Murray-Rust
Reader in Molecular Informatics
Unilever Centre, Dep. Of Chemistry
University of Cambridge
CB2 1EW, UK
+44-1223-763069
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